MCScanX
This page contains the data and programs for our protocol paper entitled “Detection of colinear blocks, and synteny and evolutionary analyses based on utilization of MCScanX”
Notice to users:
The original authors are collaborating with Dr. Xi Zhang from Dalhousie University to maintain the protocol software. Dr. Zhang has noted that the current pre-processing stage lacks a filtering step for handling multiple alternative splice isoforms per locus, which may lead to confusion among paralogous genes. To address this limitation, users are encouraged to utilize MCScanX_Assistant, which provides the necessary functionality.
Contact: Xi.Zhang@dal.ca, wyp1125@gmail.com
All data and programs in this protocol are wrapped as a single ZIP file. Click on the following link and start downloading.